|SourceForge||myspace/msbayes · Hickerson Lab · Stahl Lab · Takebayashi Lab|
This program is developed by Mike Hickerson, Eli Stahl, Wen Huang, and Naoki Takebayashi and released under the GNU Public License.
msBayes runs on Linux, Mac OS-X, and most POSIX systems. Although you need to use command line interface, it is fairly simple. Installation instructions and user documentation are available. Here are additional tips for users who can't install the required programs due to the lack of the root (super-user) access to the computer. Also check out additional tips, scripts from Mike's homepage.
May 19, 2010, Multi-locus version of msBayes (MTML-msBayes) released!
Earlier versions may contain bugs, so please update to this newest version.
For Mac users, I highly recommend you to do the following:
To install it in your home directory, do the following in Terminal.app (I'm assuming that you downloaded the binary to your desktop).
cd; tar xzvf Desktop/msbayes-mac-xxxxxxxx.tgz -C ~Substitute xxxxxxxx with the appropriate version number.
If you are using Safari browser, it may automatically uncompress and put it in your Downloads directory. Then try this:
cd; tar xvf Downloads/msbayes-mac-xxxxxxxx.tar -C ~
Don't forget to set up your PATH environmental variable to include $HOME/bin.
This is the older version which uses single locus data sets. Multi-locus version (version 20100519 and newer) can do single-locus analyses and it has additional capabilities. So please use the newer version. The format of configuration file has been slightly changed, but it should be easy to convert the older batch config file to the newer format.